STRINGSTRING
iucB protein (Yersinia pseudotuberculosis) - STRING interaction network
"iucB" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iucBannotation not available (316 aa)    
Predicted Functional Partners:
iucA
annotation not available (590 aa)
 
  0.999
iucD
annotation not available (442 aa)
 
  0.999
iucD_1
annotation not available (432 aa)
 
  0.983
iucC_2
annotation not available (582 aa)
 
   
  0.974
DJ40_3175
annotation not available (407 aa)
 
        0.890
iutA
tonB-siderophor- TonB-dependent siderophore receptor family protein (726 aa)
 
     
  0.869
iucC_1
annotation not available (604 aa)
   
  0.716
ysuG
annotation not available (614 aa)
   
  0.702
tonB
Protein TonB; Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requiring processes in the outer membrane, resulting in the release into the periplasm of ligands bound by these outer membrane proteins (252 aa)
     
   
  0.623
uspE
annotation not available (318 aa)
           
  0.592
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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