STRINGSTRING
copR protein (Yersinia pseudotuberculosis) - STRING interaction network
"copR" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
copRannotation not available (230 aa)    
Predicted Functional Partners:
cusS
Sensor protein; Member of a two-component regulatory system (461 aa)
  0.997
barA
annotation not available (939 aa)
 
  0.891
arcB
annotation not available (778 aa)
 
 
0.787
torS
annotation not available (939 aa)
 
0.755
cheA
annotation not available (718 aa)
   
 
  0.721
DJ40_2587
annotation not available (851 aa)
 
 
  0.720
cpxA
annotation not available (458 aa)
 
 
  0.678
phoR
phoR_proteo- phosphate regulon sensor kinase PhoR (438 aa)
 
  0.653
envZ
annotation not available (450 aa)
 
  0.631
rcsC_2
annotation not available (514 aa)
 
  0.594
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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