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DJ40_3194 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3194" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3194annotation not available (765 aa)    
Predicted Functional Partners:
DJ40_3193
Conserved hypothetical protein (782 aa)
 
     
  0.879
DJ40_3195
Conserved hypothetical protein (255 aa)
              0.846
DJ40_3292
annotation not available (3103 aa)
   
     
  0.809
DJ40_3192
VI_ClpV1- type VI secretion ATPase, ClpV1 family (882 aa)
              0.806
DJ40_1730
DUF2285 domain-containing protein (247 aa)
   
     
  0.804
DJ40_2606
annotation not available (5813 aa)
 
   
  0.802
DJ40_2213
annotation not available (393 aa)
 
     
  0.789
yadA_2
Hemagluttinin domain-containing protein; yadA-like C-terminal region family protein (615 aa)
   
          0.778
DJ40_717
Conserved hypothetical protein (410 aa)
   
          0.776
DJ40_3259
Uncharacterized protein (410 aa)
   
          0.774
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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