STRINGSTRING
sapC protein (Yersinia pseudotuberculosis) - STRING interaction network
"sapC" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
sapCannotation not available (296 aa)    
Predicted Functional Partners:
sapB
annotation not available (321 aa)
  0.999
sapF
annotation not available (271 aa)
  0.997
dppA_1
annotation not available (547 aa)
 
  0.997
sapD
oligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily (330 aa)
  0.996
dppB
annotation not available (339 aa)
     
  0.838
dppA_3
annotation not available (535 aa)
          0.824
ddpB
annotation not available (349 aa)
     
  0.810
dppD
oligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily (326 aa)
 
      0.798
oppB
annotation not available (306 aa)
     
  0.788
dppF
oligo_HPY- oligopeptide/dipeptide ABC transporter, ATP-binding , C-terminal domain protein; Belongs to the ABC transporter superfamily (358 aa)
 
      0.783
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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