STRINGSTRING
DJ40_320 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_320" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_320annotation not available (139 aa)    
Predicted Functional Partners:
DJ40_321
annotation not available (156 aa)
          0.990
DJ40_2832
annotation not available (131 aa)
   
   
 
0.847
DJ40_317
annotation not available (363 aa)
 
          0.707
mdaB2
annotation not available (221 aa)
 
          0.646
DJ40_322
annotation not available (357 aa)
 
     
  0.620
cusS
Sensor protein; Member of a two-component regulatory system (461 aa)
 
          0.518
DJ40_315
Uncharacterized protein (231 aa)
 
          0.488
copR
annotation not available (230 aa)
              0.416
DJ40_3176
annotation not available (277 aa)
 
   
  0.410
Hgd
annotation not available (296 aa)
 
   
  0.400
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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