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DJ40_3201 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3201" - Insertion sequence protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3201Insertion sequence protein; insA N-terminal domain protein (91 aa)    
Predicted Functional Partners:
DJ40_3202
annotation not available (122 aa)
        0.927
DJ40_3196
annotation not available (86 aa)
        0.789
DJ40_3203
Conserved hypothetical protein (73 aa)
              0.559
DJ40_3371
Putative lipoprotein (285 aa)
   
          0.511
DJ40_820
annotation not available (224 aa)
   
          0.446
DJ40_3106
annotation not available (156 aa)
   
          0.419
DJ40_2452
annotation not available (206 aa)
   
          0.418
DJ40_3715
Membrane protein (306 aa)
   
          0.404
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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