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DJ40_3208 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3208" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3208annotation not available (187 aa)    
Predicted Functional Partners:
DJ40_3209
annotation not available (97 aa)
          0.970
yfjZ
annotation not available (110 aa)
 
          0.909
ykfI
annotation not available (118 aa)
 
          0.908
yeeV
annotation not available (122 aa)
   
          0.782
yeeU
annotation not available (124 aa)
   
          0.780
DJ40_3214
annotation not available (143 aa)
 
          0.772
DJ40_1241
annotation not available (154 aa)
   
          0.673
higA_3
annotation not available (95 aa)
 
          0.644
DJ40_1249
annotation not available (69 aa)
 
          0.631
DJ40_1247
gtr1/RagA G conserved region family protein (251 aa)
   
          0.586
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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