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DJ40_3236 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3236" - Conserved hypothetical protein in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3236Conserved hypothetical protein (702 aa)    
Predicted Functional Partners:
DJ40_3237
vgr_GE- Rhs element Vgr family protein (836 aa)
 
     
  0.949
DJ40_3231
annotation not available (84 aa)
 
          0.860
DJ40_3235
Conserved hypothetical protein (249 aa)
              0.833
DJ40_3238
annotation not available (67 aa)
              0.778
DJ40_3229
annotation not available (1122 aa)
 
          0.761
vasA
Type VI secretion system baseplate subunit TssF (591 aa)
 
          0.717
DJ40_3226
Type VI secretion system baseplate subunit TssG (356 aa)
 
          0.660
DJ40_3228
annotation not available (177 aa)
 
          0.643
DJ40_3234
Protein of uncharacterised function (DUF3274) (703 aa)
 
       
0.616
DJ40_3232
annotation not available (152 aa)
              0.610
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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