STRINGSTRING
DJ40_327 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_327" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_327annotation not available (226 aa)    
Predicted Functional Partners:
DJ40_747
annotation not available (248 aa)
   
          0.763
DJ40_743
annotation not available (262 aa)
   
          0.748
fabG_1
annotation not available (271 aa)
 
          0.739
mbtB_2
High molecular weight siderophore biosynthesis protein; AA-adenyl-dom- amino acid adenylation domain protein (3889 aa)
 
 
  0.733
msbA_1
annotation not available (585 aa)
   
 
      0.667
DJ40_325
Uncharacterized protein (316 aa)
 
     
  0.650
DJ40_324
Uncharacterized protein (310 aa)
 
     
  0.650
DJ40_748
Beta-ketoacyl synthase, C-terminal domain protein (427 aa)
 
 
  0.610
DJ40_3150
annotation not available (590 aa)
   
 
      0.601
DJ40_328
annotation not available (219 aa)
     
      0.594
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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