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DJ40_3284 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3284" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3284annotation not available (366 aa)    
Predicted Functional Partners:
fhuC_1
annotation not available (262 aa)
  0.974
DJ40_886
annotation not available (360 aa)
  0.965
DJ40_858
annotation not available (352 aa)
  0.942
fhuC_2
annotation not available (261 aa)
  0.942
yusV
annotation not available (272 aa)
  0.908
fhuC
annotation not available (264 aa)
  0.906
hemU
annotation not available (334 aa)
  0.877
yfiZ
annotation not available (346 aa)
  0.876
fhuB
annotation not available (665 aa)
 
  0.865
yfhA
annotation not available (346 aa)
 
  0.864
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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