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rsmE protein (Yersinia pseudotuberculosis) - STRING interaction network
"rsmE" - Ribosomal RNA small subunit methyltransferase E in Yersinia pseudotuberculosis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Cooccurence
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[Homology]
Score
rsmERibosomal RNA small subunit methyltransferase E; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit (243 aa)    
Predicted Functional Partners:
yqgF
Putative pre-16S rRNA nuclease; Could be a nuclease involved in processing of the 5’-end of pre-16S rRNA (140 aa)
        0.921
gshB
Glut_syn- glutathione synthase; Belongs to the prokaryotic GSH synthase family (319 aa)
 
   
  0.896
sun
Ribosomal RNA small subunit methyltransferase B; Specifically methylates the cytosine at position 967 (m5C967) of 16S rRNA (429 aa)
 
 
  0.818
rodZ
Cytoskeleton protein RodZ; Cytoskeletal protein that is involved in cell-shape control through regulation of the length of the long axis (378 aa)
         
  0.719
DJ40_3427
annotation not available (211 aa)
 
            0.714
endA
annotation not available (235 aa)
   
   
  0.689
yqgE
Uncharacterized ACR, COG1678 (187 aa)
   
      0.673
rsmI
Ribosomal RNA small subunit methyltransferase I; Catalyzes the 2’-O-methylation of the ribose of cytidine 1402 (C1402) in 16S rRNA (299 aa)
 
   
  0.670
DJ40_3429
annotation not available (295 aa)
            0.658
csrA
Carbon storage regulator homolog; Could accelerate the degradation of some genes transcripts potentially through selective RNA binding (61 aa)
           
  0.657
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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