STRINGSTRING
hcpC_1 protein (Yersinia pseudotuberculosis) - STRING interaction network
"hcpC_1" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hcpC_1annotation not available (351 aa)    
Predicted Functional Partners:
mbtB_1
Pyochelin synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1909 aa)
 
     
  0.662
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (355 aa)
           
  0.590
DJ40_333
annotation not available (552 aa)
              0.577
DJ40_3870
Type VI secretion protein (341 aa)
   
   
  0.528
fucA
Class II Aldolase and Adducin N-terminal domain protein (243 aa)
   
   
  0.494
yadA_2
Hemagluttinin domain-containing protein; yadA-like C-terminal region family protein (615 aa)
 
        0.486
DJ40_3796
annotation not available (323 aa)
 
 
      0.473
DJ40_3292
annotation not available (3103 aa)
 
          0.461
DJ40_1928
annotation not available (294 aa)
 
          0.457
yadA_3
annotation not available (364 aa)
 
        0.452
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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