STRINGSTRING
creB protein (Yersinia pseudotuberculosis) - STRING interaction network
"creB" - DNA-binding response regulator CreB in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
creBDNA-binding response regulator CreB; Transcriptional regulatory , C terminal family protein (232 aa)    
Predicted Functional Partners:
creC
annotation not available (472 aa)
  0.998
creD
annotation not available (485 aa)
 
   
  0.924
barA
annotation not available (939 aa)
 
 
  0.910
phoR
phoR_proteo- phosphate regulon sensor kinase PhoR (438 aa)
 
  0.815
torS
annotation not available (939 aa)
 
  0.807
arcB
annotation not available (778 aa)
 
 
  0.776
rstB
annotation not available (434 aa)
 
  0.747
cheA
annotation not available (718 aa)
   
 
  0.721
DJ40_2587
annotation not available (851 aa)
 
 
  0.720
rcsC
Sensor histidine kinase RcsC; Component of the Rcs signaling system, which controls transcription of numerous genes. RcsC functions as a membrane- associated protein kinase that phosphorylates RcsD in response to environmental signals. The phosphoryl group is then transferred to the response regulator RcsB (949 aa)
 
 
  0.708
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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