STRINGSTRING
DJ40_335 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_335" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_335annotation not available (395 aa)    
Predicted Functional Partners:
DJ40_337
annotation not available (384 aa)
 
          0.969
DJ40_336
Uncharacterized protein (194 aa)
 
          0.968
DJ40_338
annotation not available (320 aa)
 
     
  0.961
gloB2
annotation not available (268 aa)
 
          0.819
mbtB_1
Pyochelin synthetase; AA-adenyl-dom- amino acid adenylation domain protein (1909 aa)
 
   
  0.770
DJ40_339
annotation not available (428 aa)
 
          0.762
mbtB_2
High molecular weight siderophore biosynthesis protein; AA-adenyl-dom- amino acid adenylation domain protein (3889 aa)
 
   
  0.678
fabH_1
annotation not available (335 aa)
 
        0.653
DJ40_341
annotation not available (338 aa)
 
     
  0.646
DJ40_820
annotation not available (224 aa)
 
          0.442
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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