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DJ40_3352 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3352" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3352annotation not available (120 aa)    
Predicted Functional Partners:
DJ40_3351
annotation not available (86 aa)
 
 
 
  0.936
DJ40_2528
annotation not available (86 aa)
 
 
 
  0.827
mqsR
annotation not available (98 aa)
 
     
  0.630
mqsA
annotation not available (131 aa)
 
     
  0.629
higA_3
annotation not available (95 aa)
   
          0.561
pulS
annotation not available (121 aa)
   
          0.522
DJ40_2961
annotation not available (600 aa)
 
          0.515
DJ40_3138
annotation not available (93 aa)
   
          0.513
fhaB_1
annotation not available (499 aa)
   
          0.487
DJ40_325
Uncharacterized protein (316 aa)
   
     
  0.470
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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