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DJ40_3357 protein (Yersinia pseudotuberculosis) - STRING interaction network
"DJ40_3357" - annotation not available in Yersinia pseudotuberculosis
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
DJ40_3357annotation not available (66 aa)    
Predicted Functional Partners:
DJ40_3355
annotation not available (763 aa)
 
        0.760
DJ40_1929
annotation not available (902 aa)
 
        0.640
DJ40_1842
annotation not available (902 aa)
 
        0.640
intA1_2
Prophage CP4-57 integrase; Belongs to the ’phage’ integrase family (176 aa)
 
     
  0.623
DJ40_3349
annotation not available (404 aa)
 
     
  0.613
intB
annotation not available (422 aa)
 
     
  0.607
DJ40_1259
annotation not available (404 aa)
 
     
  0.600
intS_4
annotation not available (402 aa)
 
     
  0.597
DJ40_2521
annotation not available (397 aa)
 
     
  0.597
DJ40_1322
annotation not available (416 aa)
 
     
  0.595
Your Current Organism:
Yersinia pseudotuberculosis
NCBI taxonomy Id: 633
Other names: ATCC 29833, Bacillus pseudotuberkulosis, Bacterium pseudotuberculosis, CCUG 5855, CIP 55.85, DSM 8992, NCTC 10275, Pasteurella pseudotuberculosis, Shigella pseudotuberculosis, Y. pseudotuberculosis, Yersinia pseudotuberculosis
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