STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Olsu_1232Addiction module toxin, RelE/StbE family; COGs: COG2026 Cytotoxic translational repressor of toxin-antitoxin stability system; InterPro IPR012753:IPR007712; KEGG: kse:Ksed_24250 addiction module toxin, RelE/StbE family; PFAM: plasmid stabilization system; SPTR: A4ED86 Putative uncharacterized protein; TIGRFAM: addiction module toxin, RelE/StbE family; PFAM: Plasmid stabilisation system protein; TIGRFAM: addiction module toxin, RelE/StbE family. (90 aa)    
Predicted Functional Partners:
Olsu_1233
KEGG: ccu:Ccur_10640 hypothetical protein; SPTR: A4ED87 Putative uncharacterized protein.
 
   
 0.955
Olsu_0236
Addiction module antitoxin, RelB/DinJ family; InterPro IPR007337; KEGG: swo:Swol_1074 putative DNA-damage-inducibile protein; PFAM: RelB antitoxin; SPTR: B9CME2 RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.
  
 
 0.722
Olsu_0330
Prevent-host-death family protein; Antitoxin component of a type II toxin-antitoxin (TA) system.
   
 
 0.722
Olsu_1080
Addiction module antitoxin, RelB/DinJ family; InterPro IPR007337; KEGG: aba:Acid345_2090 RelB antitoxin; PFAM: RelB antitoxin; SPTR: C2GU38 Putative uncharacterized protein; TIGRFAM: addiction module antitoxin, RelB/DinJ family; PFAM: RelB antitoxin; TIGRFAM: addiction module antitoxin, RelB/DinJ family.
  
 
 0.722
Olsu_1234
Transcriptional regulator, XRE family; InterPro IPR001387:IPR010982; KEGG: shi:Shel_15940 predicted transcriptional regulator; PFAM: helix-turn-helix domain protein; SMART: helix-turn-helix domain protein; SPTR: C7N6S8 Predicted transcriptional regulator; PFAM: Helix-turn-helix.
     
 0.443
Your Current Organism:
Olsenella uli
NCBI taxonomy Id: 633147
Other names: O. uli DSM 7084, Olsenella uli ATCC 49627, Olsenella uli DSM 7084, Olsenella uli str. DSM 7084, Olsenella uli strain DSM 7084
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