STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADK99393.1PFAM: protein of unknown function UCP030771; KEGG: oan:Oant_1787 hypothetical protein. (114 aa)    
Predicted Functional Partners:
ADK99394.1
PFAM: peptidase U35 phage prohead HK97; KEGG: U35 family peptidase.
 
    0.916
ADK99395.1
KEGG: rce:RC1_0068 phage portal protein, lambda family; TIGRFAM: phage portal protein, lambda family; PFAM: portal protein lambda.
 
    0.913
ADK99389.1
KEGG: oca:OCAR_4833 hypothetical protein.
 
     0.901
ADK99390.1
KEGG: nwi:Nwi_0802 hypothetical protein.
 
     0.901
ADK99397.1
PFAM: terminase GpA; KEGG: mgm:Mmc1_1257 phage terminase GpA.
 
    0.898
ADK99388.1
KEGG: nwi:Nwi_0800 hypothetical protein.
 
     0.884
ADK99387.1
KEGG: mch:Mchl_0291 hypothetical protein.
 
     0.880
ADL00689.1
PFAM: terminase GpA; KEGG: mno:Mnod_0598 terminase GpA.
 
    0.794
ADL00696.1
KEGG: mag:amb1176 hypothetical protein.
 
     0.734
ADL01309.1
PFAM: Protein of unknown function DUF3489; KEGG: rce:RC1_0063 hypothetical protein.
  
     0.723
Your Current Organism:
Brevundimonas subvibrioides
NCBI taxonomy Id: 633149
Other names: B. subvibrioides ATCC 15264, Brevundimonas subvibrioides ATCC 15264, Brevundimonas subvibrioides CB81, Brevundimonas subvibrioides DSM 4735, Brevundimonas subvibrioides LMG 14903, Brevundimonas subvibrioides str. ATCC 15264, Brevundimonas subvibrioides strain ATCC 15264
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.