STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADL02252.1PFAM: SMP-30/Gluconolaconase/LRE domain protein; KEGG: pzu:PHZ_c2467 gluconolactonase. (284 aa)    
Predicted Functional Partners:
ADL02249.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: pzu:PHZ_c2468 oxidoreductase, short-chain dehydrogenase/reductase family.
 
 0.972
ADL01397.1
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: bja:bll3388 3-oxoacyl-(acyl carrier protein) reductase.
 
 0.934
ADL02253.1
PFAM: Aldose 1-epimerase; KEGG: cak:Caul_0628 aldose 1-epimerase.
 
   
 0.863
ADL02254.1
Pectate lyase; KEGG: sus:Acid_1098 pectate lyase; TIGRFAM: pectate lyase; PFAM: Pectic acid lyase.
 
     0.808
ADL02251.1
PFAM: Aldehyde Dehydrogenase; KEGG: pzu:PHZ_c2469 aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
  
  
 0.782
ADL02248.1
PFAM: fumarylacetoacetate (FAA) hydrolase; KEGG: ccs:CCNA_00866 fumarylacetoacetate hydrolase family protein.
 
   
 0.746
ADL02255.1
KEGG: xcb:XC_0151 hypothetical protein.
 
   
 0.736
ADL02250.1
TIGRFAM: sugar transporter; KEGG: cak:Caul_4020 sugar transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
 
     0.693
ADL01394.1
2-dehydro-3-deoxygalactonokinase; KEGG: aav:Aave_2246 2-keto-3-deoxygalactonate kinase; PFAM: 2-keto-3-deoxy-galactonokinase.
 
   
 0.585
rplQ
KEGG: pzu:PHZ_c1255 50S ribosomal protein L17; TIGRFAM: ribosomal protein L17; PFAM: ribosomal protein L17.
 
      0.496
Your Current Organism:
Brevundimonas subvibrioides
NCBI taxonomy Id: 633149
Other names: B. subvibrioides ATCC 15264, Brevundimonas subvibrioides ATCC 15264, Brevundimonas subvibrioides CB81, Brevundimonas subvibrioides DSM 4735, Brevundimonas subvibrioides LMG 14903, Brevundimonas subvibrioides str. ATCC 15264, Brevundimonas subvibrioides strain ATCC 15264
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