STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cps-6Ubiquitinyl hydrolase 1. (1086 aa)    
Predicted Functional Partners:
ELAC2
Zinc phosphodiesterase ELAC protein 2.
   
   0.882
fen1
Flap endonuclease 1.
   
 
 0.615
T01_13900
Uncharacterized protein.
    
 
 0.611
AIFM1
Apoptosis-inducing factor 1, mitochondrial.
    
 
 0.611
T01_13047
Uncharacterized protein.
      
 0.561
birc5.2
Baculoviral IAP repeat-containing protein 5.2.
    
 
 0.503
Apaf1
Apoptotic protease-activating factor 1.
    
 
 0.497
BCL2
Apoptosis regulator Bcl-2.
      
 0.461
Lonp1
Lon protease homolog; Belongs to the peptidase S16 family.
    
 
 0.445
tatD
Tat-linked quality control protein TatD.
      
 0.408
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.