STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RpL3060S ribosomal protein L30. (248 aa)    
Predicted Functional Partners:
RpL10
60S ribosomal protein L10.
 
 
 0.998
RpL32
60S ribosomal protein L32.
   
 0.995
RpL19
Ribosomal protein L19; Belongs to the eukaryotic ribosomal protein eL19 family.
   
 0.995
RPL31
60S ribosomal protein L31.
   
 0.995
RPL3
60S ribosomal protein L3; Belongs to the universal ribosomal protein uL3 family.
   
 0.995
RpL29
60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.
   
 0.995
MRPL1
39S ribosomal protein L1, mitochondrial.
   
 0.995
rpl-9
60S ribosomal protein L9.
  
 0.995
rpl-7
60S ribosomal protein L7.
   
 0.995
rpl-26
60S ribosomal protein L26.
   
 0.995
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.