STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PiglN-acetylglucosaminyl-phosphatidylinositol de-N-acetylase. (268 aa)    
Predicted Functional Partners:
CARS
Cysteine--tRNA ligase, cytoplasmic.
  
 
 0.806
AMDHD2
N-acetylglucosamine-6-phosphate deacetylase; Belongs to the metallo-dependent hydrolases superfamily. NagA family.
    
 0.759
Pigc
Phosphatidylinositol N-acetylglucosaminyltransferase subunit C.
     
 0.628
ttx-7
Inositol-1-monophosphatase.
    
 0.626
PIGA
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
  
 
 0.620
PIGA-2
Phosphatidylinositol N-acetylglucosaminyltransferase subunit A.
  
 
 0.620
Ttf2
Transcription termination factor 2.
    
  0.601
PIGB
Mannosyltransferase.
   
  
 0.572
T01_5499
GPI-anchor transamidase; Mediates GPI anchoring in the endoplasmic reticulum, by replacing a protein's C-terminal GPI attachment signal peptide with a pre-assembled GPI. During this transamidation reaction, the GPI transamidase forms a carbonyl intermediate with the substrate protein. Belongs to the peptidase C13 family.
      
 0.559
Gpaa1
Glycosylphosphatidylinositol anchor attachment 1 protein.
      
 0.558
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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