STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Nprl2Nitrogen permease regulator 2-like protein. (699 aa)    
Predicted Functional Partners:
T01_5912
WD repeat-containing protein mio-A.
    
 0.979
Rraga
Ras-related GTP-binding protein A.
    
 0.967
Szt2
Protein SZT2.
    
 0.945
DEPDC5
DEP domain-containing protein 5.
    
 0.932
DEPDC5-2
DEP domain-containing protein 5.
    
 0.932
Sec13
Protein SEC13-like protein; Belongs to the WD repeat SEC13 family.
    
 0.929
RRAGD
Ras-related GTP-binding protein D.
    
 0.913
npp-18
Nucleoporin SEH1.
   
 0.901
seh1l
Nucleoporin seh1; Belongs to the WD repeat SEC13 family.
   
 0.901
T01_6573
Uncharacterized protein.
    
 0.853
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.