STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Dnajb12DnaJ-like protein subfamily B member 12. (441 aa)    
Predicted Functional Partners:
HSPA4L
Heat shock 70 kDa protein 4L.
 
 0.808
HSPA8
Heat shock cognate 71 kDa protein; Belongs to the heat shock protein 70 family.
 
 0.804
HSPA13
Heat shock 70 kDa protein 13.
 
 0.767
HSPA9
Stress-70 protein, mitochondrial; Belongs to the heat shock protein 70 family.
 
 0.743
hyou1
Hypoxia up-regulated protein 1.
 
 0.700
T01_15213
Trehalose-phosphatase.
  
 0.671
dnaJ
Chaperone protein DnaJ.
  
 0.648
yars
Tyrosine--tRNA ligase.
  
  
 0.613
Clybl
Citrate lyase subunit beta-like protein, mitochondrial.
 
      0.590
Dnajc2
DnaJ-like protein subfamily C member 2.
   
 0.584
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.