STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noc2lNucleolar complex protein 2-like protein. (1253 aa)    
Predicted Functional Partners:
T01_10060
Nucleolar complex protein 3-like protein.
   
 
 0.987
bop1-b
Ribosome biogenesis protein BOP1 homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the WD repeat BOP1/ERB1 family.
   
 
 0.983
nst-1
Guanine nucleotide-binding protein-like 3-like protein.
   
 
 0.978
Pes1
Pescadillo homolog; Required for maturation of ribosomal RNAs and formation of the large ribosomal subunit; Belongs to the pescadillo family.
   
 
 0.978
C18A3.3
Putative rRNA-processing protein EBP2-like protein.
   
 
 0.971
brix1
Ribosome biogenesis protein BRX1-like protein.
   
 
 0.970
T01_6761
Ribosome biogenesis protein WDR12-like protein.
   
 
 0.968
Ftsj3
Putative rRNA methyltransferase; Probable methyltransferase involved in the maturation of rRNA and in the biogenesis of ribosomal subunits.
   
 
 0.968
GTPBP4
Nucleolar GTP-binding protein 1.
   
 
 0.968
RSL1D1
Ribosomal L1 domain-containing protein 1.
   
 
 0.967
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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