STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POLR2KDNA-directed RNA polymerases I, II, and III subunit RPABC4. (65 aa)    
Predicted Functional Partners:
rpb-10
DNA-directed RNA polymerases I, II, and III subunit RPABC5.
   
 0.993
POLR2F
DNA-directed RNA polymerases I, II, and III subunit RPABC2.
   
 0.991
Polr2j
DNA-directed RNA polymerase II subunit RPB11.
   
 0.991
rpb-8
Putative DNA-directed RNA polymerases I, II, and III subunit RPABC3.
   
 0.990
POLR3H
DNA-directed RNA polymerase III subunit RPC8.
   
 0.988
Rpb4
DNA-directed RNA polymerase II 16 kDa polypeptide.
   
 0.988
Polr2b
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 0.988
D3Ertd751e
UPF0462 protein C4orf33-like protein.
   
 0.988
POLR1C
DNA-directed RNA polymerases I and III subunit RPAC1.
   
 0.988
Polr2g
DNA-directed RNA polymerase II subunit RPB7.
    
 0.987
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.