STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PDCD5Programmed cell death protein 5. (126 aa)    
Predicted Functional Partners:
RPS19S
40S ribosomal protein S19S.
  
    0.767
mrpl-11
Putative 39S ribosomal protein L11, mitochondrial; Belongs to the universal ribosomal protein uL11 family.
  
    0.767
MRPL1
39S ribosomal protein L1, mitochondrial.
  
    0.746
T01_6192
Uncharacterized protein.
   
    0.729
Rps11
40S ribosomal protein S11; Belongs to the universal ribosomal protein uS17 family.
   
    0.727
RpL30
60S ribosomal protein L30.
   
    0.726
rpl-23
60S ribosomal protein L23; Belongs to the universal ribosomal protein uL14 family.
   
  
 0.710
rps3-a
40S ribosomal protein S3-A.
   
    0.706
RPS23
40S ribosomal protein S23; Belongs to the universal ribosomal protein uS12 family.
   
    0.704
Rpl34
60S ribosomal protein L34.
   
    0.703
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.