STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LIPFLipase; Belongs to the AB hydrolase superfamily. Lipase family. (400 aa)    
Predicted Functional Partners:
mtacp1
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
  
 0.643
mtacp1-2
Acyl carrier protein, mitochondrial.
  
 0.643
Acadvl
Very long-chain specific acyl-CoA dehydrogenase, mitochondrial.
  
 0.605
ACAD9
Acyl-CoA dehydrogenase family member 9, mitochondrial.
  
 0.605
alh-13
Putative delta-1-pyrroline-5-carboxylate synthase.
     
 0.593
T01_5226
Vitellogenin.
   
 
 0.576
OXCT1
Succinyl-CoA:3-ketoacid-coenzyme A transferase; Key enzyme for ketone body catabolism. Transfers the CoA moiety from succinate to acetoacetate. Formation of the enzyme-CoA intermediate proceeds via an unstable anhydride species formed between the carboxylate groups of the enzyme and substrate.
  
 
 0.552
Adsl
Peptidylprolyl isomerase.
  
 
 0.546
OXSM
Acetyl-coenzyme A synthetase.
  
 
 0.523
Fasn
Fatty acid synthase.
  
 
 0.504
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.