STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Rasl10bRas-like protein family member 10B. (260 aa)    
Predicted Functional Partners:
ITSN1
Intersectin-1.
    
 0.905
unc-89-2
Muscle M-line assembly protein unc-89.
   
 0.811
unc-89-3
Muscle M-line assembly protein unc-89.
   
 0.811
T01_13764
Uncharacterized protein.
   
 0.765
Kalrn
Triple functional domain protein.
   
 0.765
pusl1
Cyclin-G-associated kinase.
   
 0.634
Orc1
Origin recognition complex subunit 1.
    
 0.579
Nf1
Neurofibromin.
   
 0.524
PTPN23
Tyrosine-protein phosphatase non-receptor type 23.
    
 0.522
Arhgdia
Rho GDP-dissociation inhibitor 1.
   
 0.484
Your Current Organism:
Trichinella spiralis
NCBI taxonomy Id: 6334
Other names: T. spiralis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.