Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ARB_00653 | ARB_01082 | D4AWT7 | D4AY13 | Uncharacterized protein. | Uncharacterized protein. | 0.961 |
ARB_00653 | ARB_02208 | D4AWT7 | D4B179 | Uncharacterized protein. | Oxalate decarboxylase ARB_02208; Converts oxalate to formate and CO(2) in an O(2)-dependent reaction. Can also catalyze minor side reactions: oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations. | 0.821 |
ARB_00653 | ARB_02514 | D4AWT7 | D4B231 | Uncharacterized protein. | Uncharacterized protein. | 0.800 |
ARB_00653 | ARB_02968 | D4AWT7 | D4B3D1 | Uncharacterized protein. | Uncharacterized protein. | 0.934 |
ARB_00653 | ARB_04112 | D4AWT7 | D4AIL7 | Uncharacterized protein. | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | 0.835 |
ARB_00653 | ARB_04281 | D4AWT7 | D4AJ33 | Uncharacterized protein. | Uncharacterized protein; Belongs to the LDH/MDH superfamily. | 0.905 |
ARB_00653 | ARB_04859 | D4AWT7 | D4AKL6 | Uncharacterized protein. | Probable oxalate decarboxylase ARB_04859; Converts oxalate to formate and CO(2) in an O(2)-dependent reaction. Can also catalyze minor side reactions: oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations. | 0.821 |
ARB_00653 | ARB_05242 | D4AWT7 | D4ALP4 | Uncharacterized protein. | Malic enzyme. | 0.962 |
ARB_00653 | ARB_07638 | D4AWT7 | D4ATS2 | Uncharacterized protein. | Malate synthase; Belongs to the malate synthase family. | 0.965 |
ARB_01082 | ARB_00653 | D4AY13 | D4AWT7 | Uncharacterized protein. | Uncharacterized protein. | 0.961 |
ARB_01082 | ARB_02208 | D4AY13 | D4B179 | Uncharacterized protein. | Oxalate decarboxylase ARB_02208; Converts oxalate to formate and CO(2) in an O(2)-dependent reaction. Can also catalyze minor side reactions: oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations. | 0.801 |
ARB_01082 | ARB_02514 | D4AY13 | D4B231 | Uncharacterized protein. | Uncharacterized protein. | 0.800 |
ARB_01082 | ARB_02968 | D4AY13 | D4B3D1 | Uncharacterized protein. | Uncharacterized protein. | 0.961 |
ARB_01082 | ARB_04112 | D4AY13 | D4AIL7 | Uncharacterized protein. | Formate dehydrogenase; Catalyzes the NAD(+)-dependent oxidation of formate to carbon dioxide. Formate oxidation is the final step in the methanol oxidation pathway in methylotrophic microorganisms. Has a role in the detoxification of exogenous formate in non-methylotrophic organisms. Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family. FDH subfamily. | 0.805 |
ARB_01082 | ARB_04281 | D4AY13 | D4AJ33 | Uncharacterized protein. | Uncharacterized protein; Belongs to the LDH/MDH superfamily. | 0.961 |
ARB_01082 | ARB_04859 | D4AY13 | D4AKL6 | Uncharacterized protein. | Probable oxalate decarboxylase ARB_04859; Converts oxalate to formate and CO(2) in an O(2)-dependent reaction. Can also catalyze minor side reactions: oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations. | 0.801 |
ARB_01082 | ARB_05242 | D4AY13 | D4ALP4 | Uncharacterized protein. | Malic enzyme. | 0.984 |
ARB_01082 | ARB_07638 | D4AY13 | D4ATS2 | Uncharacterized protein. | Malate synthase; Belongs to the malate synthase family. | 0.877 |
ARB_02208 | ARB_00653 | D4B179 | D4AWT7 | Oxalate decarboxylase ARB_02208; Converts oxalate to formate and CO(2) in an O(2)-dependent reaction. Can also catalyze minor side reactions: oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations. | Uncharacterized protein. | 0.821 |
ARB_02208 | ARB_01082 | D4B179 | D4AY13 | Oxalate decarboxylase ARB_02208; Converts oxalate to formate and CO(2) in an O(2)-dependent reaction. Can also catalyze minor side reactions: oxalate oxidation to produce H(2)O(2), and oxalate-dependent, H(2)O(2)-independent dye oxidations. | Uncharacterized protein. | 0.801 |
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