STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MGYG_02096Bifunctional lycopene cyclase/phytoene synthase; Bifunctional enzyme that catalyzes the reactions from geranylgeranyl diphosphate to phytoene (phytoene synthase) and lycopene to beta-carotene via the intermediate gamma-carotene (lycopene cyclase). (594 aa)    
Predicted Functional Partners:
MGYG_02095
Phytoene dehydrogenase.
 
 0.991
MGYG_06784
3-keto-steroid reductase.
   
 
 0.902
MGYG_03521
Geranylgeranyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.884
MGYG_04278
Farnesyl pyrophosphate synthetase; Belongs to the FPP/GGPP synthase family.
  
 0.883
MGYG_05594
Decaprenyl-diphosphate synthase subunit 1; Belongs to the FPP/GGPP synthase family.
  
 0.882
MGYG_02925
Ergosterol biosynthesis protein.
   
 
 0.876
MGYG_07358
Squalene monooxygenase.
   
 
 0.866
MGYG_02469
Fusicoccadiene synthase.
  
 0.842
MGYG_04589
C-5 sterol desaturase; Belongs to the sterol desaturase family.
  
 0.814
MGYG_06294
C-5 sterol desaturase.
  
 0.814
Your Current Organism:
Nannizzia gypsea
NCBI taxonomy Id: 535722
Other names: Arthroderma gypseum CBS 118893, Microsporum gypseum CBS 118893, N. gypsea CBS 118893, Nannizzia gypsea CBS 118893
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