STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLX_21160Lipopolysaccharide biogenesis periplasmic protein. (713 aa)    
Predicted Functional Partners:
GLX_17920
Hypothetical protein.
  
     0.579
GLX_03420
Hypothetical protein.
  
   
 0.549
GLX_20660
Hypothetical protein.
  
     0.530
GLX_24850
Lipopolysaccharide biogenesis periplasmic protein.
  
     0.506
ilvD
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
    0.491
GLX_12760
Hypothetical protein.
  
     0.483
GLX_10900
Hypothetical protein.
  
     0.469
GLX_06060
Hypothetical protein.
  
     0.466
GLX_26440
Hypothetical protein.
  
     0.452
GLX_10270
Ankyrin repeat protein.
  
     0.447
Your Current Organism:
Komagataeibacter medellinensis
NCBI taxonomy Id: 634177
Other names: Gluconacetobacter medellinensis NBRC 3288, Gluconacetobacter xylinus IFO 3288, Gluconacetobacter xylinus NBRC 3288, K. medellinensis NBRC 3288, Komagataeibacter medellinensis NBRC 3288
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.