STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHG20040.1Protein of unknown function. (179 aa)    
Predicted Functional Partners:
SHG03113.1
Tetratricopeptide repeat-containing protein.
  
     0.728
SHH08384.1
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
  
     0.722
SHF81369.1
2OG-Fe(II) oxygenase superfamily protein.
  
     0.684
SHH24502.1
Sodium transport system permease protein.
  
     0.640
SHH04003.1
Protein of unknown function.
  
     0.583
SHG31873.1
Extracellular lipase, Pla-1/cef family.
  
     0.547
SHH12247.1
TonB-dependent receptor.
  
     0.543
SHG94566.1
MerC mercury resistance protein.
  
     0.540
SHF74081.1
Putative adhesin.
  
     0.509
SHH24534.1
Sodium transport system ATP-binding protein.
  
     0.504
Your Current Organism:
Marisediminitalea aggregata
NCBI taxonomy Id: 634436
Other names: Aestuariibacter aggregatus, Aestuariibacter aggregatus Wang et al. 2010, Alteromonas sp. WH169, CGMCC 1.8995, LMG 25283, LMG:25283, M. aggregata, Marisediminitalea aggregata (Wang et al. 2010) Zhang et al., strain WH169
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.