STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glgAGlycogen/starch synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose. (542 aa)    
Predicted Functional Partners:
glgB
Glycogen branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
 
 0.998
glgX
Glycogen debranching enzyme GlgX; Isoamylase/glycosyl hydrolase; Belongs to the glycosyl hydrolase 13 family.
  
 0.953
BAI00202.1
Malto-oligosyltrehalose trehalohydrolase; Alpha amylase, catalytic region.
  
 0.927
tal
Bifunctional protein [transaldolase and glucose-6-phosphate isomerase]; Transaldolase is important for the balance of metabolites in the pentose-phosphate pathway; Belongs to the GPI family.
  
  
 0.745
BAH99536.1
Alcohol dehydrogenase iron-containing.
   
  
 0.711
BAI00201.1
1,4-alpha-D-glucan 1-alpha-D-glucosylmutase; Alpha amylase catalytic region/malto-oligosyltrehalose synthase/glycosyl hydrolase.
  
  
 0.709
BAH99670.1
Hypothetical protein.
   
  
 0.460
BAI00206.1
Hypothetical protein; Transcriptional regulator.
  
    0.401
Your Current Organism:
Acetobacter pasteurianus
NCBI taxonomy Id: 634452
Other names: A. pasteurianus IFO 3283-01, Acetobacter pasteurianus IFO 3283-01
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