Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
HAH_0510 | aor1 | HAH_0510 | HAH_1907 | Molybdate transport protein. | Aldehyde ferredoxin oxidoreductase. | 0.706 |
HAH_0510 | aor2 | HAH_0510 | HAH_2534 | Molybdate transport protein. | Aldehyde ferredoxin oxidoreductase. | 0.704 |
HAH_0510 | aor3 | HAH_0510 | HAH_2557 | Molybdate transport protein. | Aldehyde ferredoxin oxidoreductase. | 0.709 |
HAH_0510 | fdoH | HAH_0510 | HAH_1920 | Molybdate transport protein. | Formate dehydrogenase, iron-sulfur subunit. | 0.456 |
HAH_0510 | mobA | HAH_0510 | HAH_1906 | Molybdate transport protein. | Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.572 |
HAH_0510 | moeA2 | HAH_0510 | HAH_1891 | Molybdate transport protein. | Molybdopterin biosynthesis protein moeA. | 0.818 |
HAH_1908 | HAH_1909 | HAH_1908 | HAH_1909 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.637 |
HAH_1908 | aor1 | HAH_1908 | HAH_1907 | Conserved hypothetical protein. | Aldehyde ferredoxin oxidoreductase. | 0.851 |
HAH_1908 | mobA | HAH_1908 | HAH_1906 | Conserved hypothetical protein. | Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.543 |
HAH_1909 | HAH_1908 | HAH_1909 | HAH_1908 | Conserved hypothetical protein. | Conserved hypothetical protein. | 0.637 |
HAH_1909 | aor1 | HAH_1909 | HAH_1907 | Conserved hypothetical protein. | Aldehyde ferredoxin oxidoreductase. | 0.637 |
HAH_1909 | mobA | HAH_1909 | HAH_1906 | Conserved hypothetical protein. | Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.451 |
aor1 | HAH_0510 | HAH_1907 | HAH_0510 | Aldehyde ferredoxin oxidoreductase. | Molybdate transport protein. | 0.706 |
aor1 | HAH_1908 | HAH_1907 | HAH_1908 | Aldehyde ferredoxin oxidoreductase. | Conserved hypothetical protein. | 0.851 |
aor1 | HAH_1909 | HAH_1907 | HAH_1909 | Aldehyde ferredoxin oxidoreductase. | Conserved hypothetical protein. | 0.637 |
aor1 | aor2 | HAH_1907 | HAH_2534 | Aldehyde ferredoxin oxidoreductase. | Aldehyde ferredoxin oxidoreductase. | 0.919 |
aor1 | aor3 | HAH_1907 | HAH_2557 | Aldehyde ferredoxin oxidoreductase. | Aldehyde ferredoxin oxidoreductase. | 0.919 |
aor1 | fdoH | HAH_1907 | HAH_1920 | Aldehyde ferredoxin oxidoreductase. | Formate dehydrogenase, iron-sulfur subunit. | 0.700 |
aor1 | hmoA | HAH_1907 | HAH_1808 | Aldehyde ferredoxin oxidoreductase. | Molybdopterin oxidoreductase. | 0.700 |
aor1 | mobA | HAH_1907 | HAH_1906 | Aldehyde ferredoxin oxidoreductase. | Molybdopterin-guanine dinucleotide biosynthesis protein A; Transfers a GMP moiety from GTP to Mo-molybdopterin (Mo-MPT) cofactor (Moco or molybdenum cofactor) to form Mo-molybdopterin guanine dinucleotide (Mo-MGD) cofactor. | 0.682 |
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