STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsBD-ribose-binding periplasmic protein; silverDB:661Eb00023. (292 aa)    
Predicted Functional Partners:
rbsC
Ribose transport permease system protein; silverDB:661Eb00021; Belongs to the binding-protein-dependent transport system permease family.
 0.998
rbcL
Ribulose bisphosphate carboxylase large chain; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
 0.994
rbsD
Cytoplasmic D-ribose-binding protein RbsD; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.989
rbsC-2
Probable sugar ABC transporter, permease protein; silverDB:661Eb02905; Belongs to the binding-protein-dependent transport system permease family.
 0.967
EbC_20810
ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, permease protein; silverDB:661Eb02799; Belongs to the binding-protein-dependent transport system permease family.
 
  0.964
EbC_33190
Sugar ABC transporter, permease protein; silverDB:661Eb04354; Belongs to the binding-protein-dependent transport system permease family.
 0.962
EbC_20820
ABC transporter, carbohydrate uptake transporter-2 (CUT2) family, permease protein; silverDB:661Eb02801; Belongs to the binding-protein-dependent transport system permease family.
 0.961
rbsK
Ribokinase; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway.
 
  
 0.953
EbC_17630
Methyl-accepting chemotaxis sensory transducer; silverDB:661Eb02366.
     
  0.900
tar-2
Methyl-accepting chemotaxis sensory transducer; silverDB:661Eb03545.
     
 0.900
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.