STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_05010Conserved uncharacterized protein; silverDB:661Eb00666; Belongs to the UPF0149 family. (201 aa)    
Predicted Functional Partners:
EbC_33330
Conserved uncharacterized protein; silverDB:661Eb04370.
  
     0.717
osmE
Osmotically-inducible lipoprotein E (Activator of ntr-like gene); silverDB:661Eb02525.
  
     0.696
EbC_32640
Putative negative regulator; silverDB:661Eb04283.
  
     0.651
EbC_34380
Conserved uncharacterized protein; silverDB:661Eb04491.
  
     0.631
ompX
Virulence-related outer membrane protein X; silverDB:661Eb01929.
  
     0.625
EbC_23390
Conserved uncharacterized protein; silverDB:661Eb03139.
  
     0.576
EbC_05000
Shikimate 5-dehydrogenase; silverDB:661Eb00665.
       0.568
tsx
Nucleoside channel; silverDB:661Eb04486.
  
     0.567
EbC_24840
Conserved uncharacterized protein; silverDB:661Eb03318.
  
     0.558
EbC_35890
Conserved uncharacterized protein; silverDB:661Eb04694.
  
     0.554
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.