STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_05410Major facilitator superfamily transporter; silverDB:661Eb00723. (459 aa)    
Predicted Functional Partners:
EbC_05400
Protocatechuate 4,5-dioxygenase; silverDB:661Eb00722.
 
    0.870
EbC_05390
Amidohydrolase 2 family; silverDB:661Eb00721.
 
    0.852
aroQ-2
3-dehydroquinate dehydratase, type II; Catalyzes a trans-dehydration via an enolate intermediate. Belongs to the type-II 3-dehydroquinase family.
       0.736
EbC_43240
D-galactonate transporter; silverDB:661Eb05660.
  
     0.487
EbC_39250
Major facilitator superfamily MFS_1; silverDB:661Eb05136.
  
     0.472
EbC_22240
General substrate transporter; silverDB:661Eb02986.
  
     0.452
EbC_43420
Transporter, major facilitator superfamily; silverDB:661Eb05687.
  
     0.423
EbC_05370
Transcriptional regulator, LysR family; silverDB:661Eb00719; Belongs to the LysR transcriptional regulatory family.
  
    0.403
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.