STRINGSTRING
EbC_05410 protein (Erwinia billingiae) - STRING interaction network
"EbC_05410" - Major facilitator superfamily transporter in Erwinia billingiae
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_05410Major facilitator superfamily transporter; silverDB-661Eb00723 (459 aa)    
Predicted Functional Partners:
EbC_05400
Protocatechuate 4,5-dioxygenase; silverDB-661Eb00722 (419 aa)
 
        0.924
EbC_05390
Amidohydrolase 2 family; silverDB-661Eb00721 (274 aa)
 
          0.892
EbC_05380
3-dehydroquinate dehydratase; Catalyzes a trans-dehydration via an enolate intermediate; Belongs to the type-II 3-dehydroquinase family (143 aa)
              0.811
EbC_05370
Transcriptional regulator, LysR family; silverDB-661Eb00719 (411 aa)
 
      0.582
EbC_05340
Conserved uncharacterized protein; silverDB-661Eb00714 (366 aa)
   
          0.517
EbC_05350
4-carboxy-4-hydroxy-2-oxoadipate aldolase/oxaloacetate decarboxylase; silverDB-661Eb00716 (237 aa)
 
        0.463
EbC_05330
Phosphogluconate dehydrogenase, NAD-binding; silverDB-661Eb00712 (294 aa)
 
          0.457
EbC_05360
N-acetylglucosaminyl phosphatidylinositol deacetylase family protein; silverDB-661Eb00717 (247 aa)
   
        0.430
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
Server load: low (15%) [HD]