STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_05830Conserved uncharacterized protein; silverDB:661Eb00777. (175 aa)    
Predicted Functional Partners:
EbC_05840
Conserved uncharacterized protein; silverDB:661Eb00778.
 
 0.998
EbC_05790
OmpA family protein; silverDB:661Eb00772.
 
  
 0.984
EbC_04060
Conserved uncharacterized protein; silverDB:661Eb00535.
 
 0.981
EbC_05820
Conserved uncharacterized protein; silverDB:661Eb00776.
 
  
 0.975
EbC_05910
Predicted virulence protein, SciE type family protein; silverDB:661Eb00791.
 
   0.966
EbC_05780
Conserved uncharacterized protein; silverDB:661Eb00771.
 
  
 0.949
EbC_05850
Conserved uncharacterized protein; silverDB:661Eb00779.
 
 
 0.927
EbC_44930
Conserved uncharacterized protein; silverDB:661Eb05896.
 
 
 0.925
EbC_27020
Putative Type VI secretion system effector; silverDB:661Eb03588.
 
 
 0.924
EbC_05920
Type VI secretion system, lysozyme-related family protein; silverDB:661Eb00792.
 
  
 0.915
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.