STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_19570Putative sugar ABC transporter, permease protein; silverDB:661Eb02639; Belongs to the binding-protein-dependent transport system permease family. (328 aa)    
Predicted Functional Partners:
EbC_19550
Putative sugar ABC transporter, ATP-binding protein; silverDB:661Eb02636.
  0.998
ytfQ
ABC transporter periplasmic-binding protein YtfQ; silverDB:661Eb02635.
 0.993
EbC_19560
Putative sugar ABC transporter, permease protein; silverDB:661Eb02637; Belongs to the binding-protein-dependent transport system permease family.
 
  
 
0.993
EbC_06300
Periplasmic binding protein/LacI transcriptional regulator; silverDB:661Eb00850.
 
 0.789
EbC_28210
Sugar ABC transporter, periplasmic sugar-binding protein; silverDB:661Eb03744.
 
 0.776
rbsB-2
RbsB protein; silverDB:661Eb02903.
 
 
 0.763
EbC_20510
Periplasmic binding protein/LacI transcriptional regulator; silverDB:661Eb02758.
 
 0.759
xytB
Putative sugar ABC transporter, periplasmic protein; silverDB:661Eb02496.
 
 0.745
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
   0.736
araG
L-arabinose transport ATP-binding protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
   0.708
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.