STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EbC_29820ABC transporter, permease component; silverDB:661Eb03947; Belongs to the binding-protein-dependent transport system permease family. (336 aa)    
Predicted Functional Partners:
mglA
ABC transporter, ATP-binding protein; silverDB:661Eb03948.
  
  0.996
mglB
ABC transporter, periplasmic D-galactose-binding protein; silverDB:661Eb03949.
 
 
 0.981
EbC_28210
Sugar ABC transporter, periplasmic sugar-binding protein; silverDB:661Eb03744.
  
 0.791
EbC_06300
Periplasmic binding protein/LacI transcriptional regulator; silverDB:661Eb00850.
  
 0.786
rbcL
Ribulose bisphosphate carboxylase large chain; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.777
rbsA-2
Sugar ABC transporter, ATPase component; Part of the ABC transporter complex RbsABC involved in ribose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Ribose importer (TC 3.A.1.2.1) family.
  
 0.772
EbC_20510
Periplasmic binding protein/LacI transcriptional regulator; silverDB:661Eb02758.
  
 0.766
xylG
D-xylose ABC transporter, ATPase subunit; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
  
 0.755
araG
L-arabinose transport ATP-binding protein; Part of the ABC transporter complex AraFGH involved in arabinose import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Arabinose importer (TC 3.A.1.2.2) family.
  
 0.729
rbsB-2
RbsB protein; silverDB:661Eb02903.
  
 0.727
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.