STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yojIABC transporter, ATP-binding protein; silverDB:661Eb04004. (550 aa)    
Predicted Functional Partners:
iucD
L-lysine 6-monooxygenase (NADPH); silverDB:661Eb03335.
 
  
 0.747
fhuF
Ferric iron reductase protein FhuF; silverDB:661Eb00761.
 
  
 0.605
mdoB
Phosphoglycerol transferase I; silverDB:661Eb05095.
  
     0.600
fhuD-2
Ferrichrome-binding periplasmic protein; silverDB:661Eb01080.
 
    0.587
alkB
DNA repair system specific for alkylated DNA; silverDB:661Eb04005.
       0.565
fhuA
Ferrichrome iron receptor; silverDB:661Eb01078.
 
  
 0.556
fhuD
Ferrichrome-binding periplasmic protein; silverDB:661Eb00438.
 
    0.548
EbC_06320
Similar to non-ribosomal peptide synthase; silverDB:661Eb00854; Belongs to the ATP-dependent AMP-binding enzyme family.
 
  
 0.507
apbE
Thiamine biosynthesis lipoprotein; Flavin transferase that catalyzes the transfer of the FMN moiety of FAD and its covalent binding to the hydroxyl group of a threonine residue in a target flavoprotein. Belongs to the ApbE family.
     
 0.504
EbC_26870
Conserved uncharacterized protein; silverDB:661Eb03568; Belongs to the MtfA family.
  
     0.496
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.