STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
goaG4-aminobutyrate aminotransferase; silverDB:661Eb04090; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. (419 aa)    
Predicted Functional Partners:
panD
Aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine.
    
 0.918
panC
Pantoate-beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family.
  
 
 0.917
gabT3
4-aminobutyrate transaminase; silverDB:661Eb03750; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
0.910
gabT1
4-aminobutyrate transaminase; silverDB:661Eb03134; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
 
 
 
0.907
EbC_15560
Putative NAD-dependent aldehyde dehydrogenase; silverDB:661Eb02081; Belongs to the aldehyde dehydrogenase family.
    
 0.904
gabD
Succinate-semialdehyde dehydrogenase; silverDB:661Eb02868; Belongs to the aldehyde dehydrogenase family.
    
 0.904
aldD
NAD-dependent aldehyde dehydrogenase; silverDB:661Eb03026.
    
 0.904
EbC_28360
Betaine-aldehyde dehydrogenase; silverDB:661Eb03764; Belongs to the aldehyde dehydrogenase family.
   
 0.904
EbC_28370
Succinic semialdehyde dehydrogenase; silverDB:661Eb03766; Belongs to the aldehyde dehydrogenase family.
   
 0.904
EbC_40620
Succinate semialdehyde dehydrogenase; silverDB:661Eb05322; Belongs to the aldehyde dehydrogenase family.
   
 0.904
Your Current Organism:
Erwinia billingiae
NCBI taxonomy Id: 634500
Other names: E. billingiae Eb661, Erwinia billingiae Eb661, Erwinia billingiae str. Eb661, Erwinia billingiae strain Eb661
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.