STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_03230Putative transcriptional regulator. (124 aa)    
Predicted Functional Partners:
Bgr_03220
Adenine-specific DNA methyltransferase.
       0.581
Bgr_03780
Phage repressor protein.
  
     0.530
Bgr_03200
Hypothetical protein.
       0.525
Bgr_03210
Hypothetical membrane protein.
       0.525
Bgr_12500
Autotransporter.
  
     0.519
invB
Invasion-associated protein B.
  
     0.518
Bgr_12220
Hypothetical membrane protein.
  
     0.514
virB6
VirB6 protein.
  
     0.512
Bgr_16070
Autotransporter.
  
     0.494
Bgr_03180
Phage related lysozyme.
       0.481
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.