STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
gp19Phage protein Gp19. (127 aa)    
Predicted Functional Partners:
gp20
Phage protein Gp20.
 
     0.945
gpA1
Phage terminase large subunit GpA1.
 
  
 0.919
Bgr_03560
Phage portal protein.
 
     0.866
gpA2
Phage terminase large subunit GpA2.
 
  
 0.865
Bgr_03590
Phage protein.
 
     0.853
gpW1
Phage baseplate assembly protein GpW1.
  
   0.827
gpW2
Phage baseplate assembly protein GpW2.
  
   0.827
gpW3
Phage baseplate assembly protein gpW3.
  
   0.827
gpFII
Phage tail tube protein FII.
  
   0.785
gpFII-2
Phage tail tube protein FII.
  
   0.785
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.