gpU2 protein (Bartonella grahamii) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

gpU2

Phage tail protein U2. (126 aa)

Predicted Functional Partners:

gpX2

0.988

gpD2

0.973

gpFII-2

0.972

gpFI-2

0.969

gpX1

0.948

gpJ1

0.947

gpJ2

0.947

gpFII

0.945

gpFI

0.939

gpFI-3

0.939

Your Current Organism:

Bartonella grahamii

NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
gpD2	gpFI	Bgr_08740	Bgr_03370	Phage late control protein D2.	Phage tail sheath protein FI.	0.946
gpD2	gpFI-2	Bgr_08740	Bgr_08800	Phage late control protein D2.	Phage tail sheath protein FI.	0.973
gpD2	gpFI-3	Bgr_08740	Bgr_16220	Phage late control protein D2.	Phage tail sheath protein FI.	0.946
gpD2	gpFII	Bgr_08740	Bgr_03360	Phage late control protein D2.	Phage tail tube protein FII.	0.905
gpD2	gpFII-2	Bgr_08740	Bgr_08790	Phage late control protein D2.	Phage tail tube protein FII.	0.952
gpD2	gpJ1	Bgr_08740	Bgr_03420	Phage late control protein D2.	Phage baseplate assembly protein GpJ1.	0.907
gpD2	gpJ2	Bgr_08740	Bgr_08900	Phage late control protein D2.	Phage baseplate assembly protein GpJ2.	0.907
gpD2	gpU2	Bgr_08740	Bgr_08760	Phage late control protein D2.	Phage tail protein U2.	0.973
gpD2	gpX1	Bgr_08740	Bgr_03320	Phage late control protein D2.	Phage tail protein X1.	0.907
gpD2	gpX2	Bgr_08740	Bgr_08750	Phage late control protein D2.	Phage tail protein X2.	0.978
gpFI	gpD2	Bgr_03370	Bgr_08740	Phage tail sheath protein FI.	Phage late control protein D2.	0.946
gpFI	gpFII	Bgr_03370	Bgr_03360	Phage tail sheath protein FI.	Phage tail tube protein FII.	0.991
gpFI	gpFII-2	Bgr_03370	Bgr_08790	Phage tail sheath protein FI.	Phage tail tube protein FII.	0.964
gpFI	gpJ1	Bgr_03370	Bgr_03420	Phage tail sheath protein FI.	Phage baseplate assembly protein GpJ1.	0.955
gpFI	gpJ2	Bgr_03370	Bgr_08900	Phage tail sheath protein FI.	Phage baseplate assembly protein GpJ2.	0.955
gpFI	gpU2	Bgr_03370	Bgr_08760	Phage tail sheath protein FI.	Phage tail protein U2.	0.939
gpFI	gpX1	Bgr_03370	Bgr_03320	Phage tail sheath protein FI.	Phage tail protein X1.	0.978
gpFI	gpX2	Bgr_03370	Bgr_08750	Phage tail sheath protein FI.	Phage tail protein X2.	0.956
gpFI-2	gpD2	Bgr_08800	Bgr_08740	Phage tail sheath protein FI.	Phage late control protein D2.	0.973
gpFI-2	gpFII	Bgr_08800	Bgr_03360	Phage tail sheath protein FI.	Phage tail tube protein FII.	0.964