STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Bgr_18890Hypothetical protein. (198 aa)    
Predicted Functional Partners:
leuS
leucyl-tRNA synthetase; Belongs to the class-I aminoacyl-tRNA synthetase family.
       0.786
Bgr_16380
Outer membrane protein, porin; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
 
     0.733
Bgr_04250
AsmA family protein.
  
     0.724
ftsX
Cell division protein.
  
     0.695
Bgr_06130
Hypothetical transmembrane protein.
  
     0.642
Bgr_11420
Hypothetical protein.
  
     0.641
hbpB
Hemin binding protein B; Forms passive diffusion pores that allow small molecular weight hydrophilic materials across the outer membrane.
  
     0.611
Bgr_03870
Putative transmembrane protein.
  
     0.609
Bgr_19830
Putative DNA polymerase III subunit delta.
 
    0.609
hbpD
Hemin binding protein D.
  
     0.603
Your Current Organism:
Bartonella grahamii
NCBI taxonomy Id: 634504
Other names: B. grahamii as4aup, Bartonella grahamii as4aup, Bartonella grahamii str. as4aup, Bartonella grahamii strain as4aup
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.