STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ADG82929.1KEGG: pth:PTH_1749 hypothetical protein; TIGRFAM: sporulation integral membrane protein YlbJ; PFAM: nucleoside recognition domain protein. (430 aa)    
Predicted Functional Partners:
ADG83263.1
KEGG: dae:Dtox_3071 sporulation protein YqfD; TIGRFAM: sporulation protein YqfD; PFAM: putative stage IV sporulation YqfD.
 
   
 0.836
ADG83264.1
KEGG: dae:Dtox_3072 sporulation protein YqfC; TIGRFAM: sporulation protein YqfC; PFAM: protein of unknown function DUF1429.
 
   
 0.834
ADG81076.1
KEGG: dae:Dtox_0222 sporulation protein YabP; TIGRFAM: sporulation protein YabP; PFAM: YabP family protein.
  
   
 0.795
ADG82517.1
KEGG: drm:Dred_1095 hypothetical protein; TIGRFAM: stage II sporulation protein M; PFAM: protein of unknown function DUF95 transmembrane.
  
   
 0.779
ADG82573.1
KEGG: dae:Dtox_2607 stage III sporulation protein AE; TIGRFAM: stage III sporulation protein AE; PFAM: Sporulation stage III protein AE.
  
    0.778
ADG82571.1
TIGRFAM: stage III sporulation protein AG; KEGG: dae:Dtox_2605 stage III sporulation protein AG.
  
   
 0.773
ADG82995.1
PFAM: peptidase U4 sporulation factor SpoIIGA; KEGG: mta:Moth_0851 sporulation factor SpoIIGA.
  
   
 0.773
ADG82574.1
KEGG: pth:PTH_1169 hypothetical protein; TIGRFAM: stage III sporulation protein AD; PFAM: Sporulation stage III protein AD.
  
     0.771
ADG81090.1
SMART: protein phosphatase 2C domain protein; TIGRFAM: stage II sporulation protein E; KEGG: drm:Dred_0124 phosphoprotein phosphatase; PFAM: Stage II sporulation E family protein.
  
     0.766
ADG82992.1
KEGG: dae:Dtox_1068 stage II sporulation protein R; TIGRFAM: stage II sporulation protein R; PFAM: Sporulation stage II protein R.
  
   
 0.764
Your Current Organism:
Thermincola potens
NCBI taxonomy Id: 635013
Other names: T. potens JR, Thermincola potens JR, Thermincola potens str. JR, Thermincola potens strain JR, Thermincola sp. JR
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.