STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cbbLRibulose bisphosphate carboxylase, large chain RbcL; RuBisCO catalyzes two reactions: the carboxylation of D- ribulose 1,5-bisphosphate, the primary event in carbon dioxide fixation, as well as the oxidative fragmentation of the pentose substrate in the photorespiration process. Both reactions occur simultaneously and in competition at the same active site. (476 aa)    
Predicted Functional Partners:
ACC82572.1
PFAM: ribulose bisphosphate carboxylase, small chain; KEGG: ana:alr1526 ribulose 1,5-bisphosphate carboxylase/oxygenase small subunit.
 
 0.999
ACC82571.1
PFAM: chaperonin family protein RbcX; KEGG: ava:Ava_3906 chaperonin-like RbcX.
   
 
 0.989
ACC82669.1
PFAM: ribulose bisphosphate carboxylase, small chain; transferase hexapeptide repeat containing protein; KEGG: ava:Ava_4469 ribulose bisphosphate carboxylase, small chain.
  
 
 0.985
ACC82805.1
KEGG: ana:all5250 hypothetical protein.
    
 
 0.973
ACC84674.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: ava:Ava_0169 phosphoribulokinase.
 
  
 0.961
ACC81289.1
PFAM: phosphoribulokinase/uridine kinase; KEGG: ava:Ava_0781 phosphoribulokinase.
 
  
 0.947
pgk
PFAM: phosphoglycerate kinase; KEGG: ava:Ava_0772 phosphoglycerate kinase; Belongs to the phosphoglycerate kinase family.
    
 0.921
ACC81029.1
TIGRFAM: HAD-superfamily hydrolase, subfamily IA, variant 1; PFAM: Haloacid dehalogenase domain protein hydrolase; KEGG: ava:Ava_1504 HAD-superfamily hydrolase, subfamily IA, variant 1.
     
 0.905
ACC83540.1
KEGG: ana:alr2873 hypothetical protein.
     
  0.900
ACC82576.1
PFAM: ribulose bisphosphate carboxylase, small chain; AAA ATPase, central domain protein; KEGG: ava:Ava_3903 AAA ATPase, central region.
  
 
 0.866
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
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