STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
uxaCPFAM: Glucuronate isomerase; KEGG: sde:Sde_1272 sodium pump decarboxylase, gamma subunit. (472 aa)    
Predicted Functional Partners:
hrmR
PFAM: regulatory protein, LacI; periplasmic binding protein/LacI transcriptional regulator; KEGG: ava:Ava_2170 transcriptional regulator, LacI family.
 
  
 0.947
ACC83647.1
Inositol oxygenase HrmE; PFAM: Protein of unknown function DUF706; KEGG: sus:Acid_4072 inositol oxygenase.
    
 0.888
hrmK
TIGRFAM: carbohydrate kinase, thermoresistant glucokinase family; PFAM: shikimate kinase; KEGG: ana:alr3086 gluconokinase.
 
   
 0.840
ACC83653.1
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rxy:Rxyl_0080 short-chain dehydrogenase/reductase SDR.
 
  
 0.699
ACC83654.1
KEGG: cef:CE2358 hypothetical protein.
 
     0.695
ACC81255.1
TIGRFAM: 2-dehydro-3-deoxyphosphogluconate aldolase/4-hydroxy-2-oxoglutarate aldolase; PFAM: KDPG and KHG aldolase; KEGG: ana:all4771 KHG-KDPG bifunctional aldolase.
 
   
 0.668
ACC78995.1
PFAM: glycoside hydrolase family 2, immunoglobulin domain protein beta-sandwich; glycoside hydrolase family 2, TIM barrel; glycoside hydrolase family 2, sugar binding; KEGG: nmu:Nmul_A1940 glycoside hydrolase family 2, sugar binding; Belongs to the glycosyl hydrolase 2 family.
 
  
 0.496
ACC79005.1
PFAM: glycoside hydrolase, family 43; KEGG: dge:Dgeo_2722 glycoside hydrolase, family 43; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.454
ACC83642.1
TIGRFAM: sugar transporter; PFAM: General substrate transporter; major facilitator superfamily MFS_1; KEGG: syn:sll0771 glucose transport protein; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
     0.405
Your Current Organism:
Nostoc punctiforme
NCBI taxonomy Id: 63737
Other names: N. punctiforme PCC 73102, Nostoc punctiforme ATCC 29133, Nostoc punctiforme PCC 73102, Nostoc sp. (strain ATCC 29133 / PCC 73102), Nostoc sp. ATCC 29133, Nostoc sp. PCC 73102
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